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CVE-2025-10999 — openbabel

Fix: openbabel/openbabel@ecaed96

CVE-2025-10999 is a CWE-404 vulnerability in openbabel. A fix is available for openbabel — see the affected versions and patch details below.

Open Babel cacaoformat.cpp SetHilderbrandt null pointer dereference

Also known asGHSA-55j6-rjhx-hwfhPYSEC-2026-2772
Published
Updated
Affected
1 pkg
Patched
1 / 1
Exploits
None indexed
Exploitation data as of Oct 23, 2026 · OSV.dev, NVD, FIRST.org (EPSS)

Exploitation Status

Proof-of-concept exploit code exists

  • CISA’s SSVC triage found public proof-of-concept exploit code for this CVE, though no confirmed active exploitation.

Exploitation and automatability from CISA’s SSVC triage for CVE-2025-10999.

EPSS Exploitation Probability

via FIRST.org ↗
0.3%probability of exploitation in next 30 days
Lower Risk+0.01%
Lower risk than most CVEs16th percentile — riskier than 16% of all scored CVEsHighest risk
0.00%0.25%0.50%0.75%0.0%0.3%Apr 26Aug 26Oct 26

Probability of exploitation in the next 30 days, from FIRST.org EPSS.

Real-World Exposure

1 pkg affected
🐍openbabel

Real-time download stats are indexed for npm and PyPI packages. This vulnerability affects PyPI packages — download data is not available via public APIs for these ecosystems.

Description

Summary

A memory-safety vulnerability in Open Babel's CACAO parser caused a NULL pointer dereference when reading a crafted input file.

Details

The flaw was in CacaoFormat::SetHilderbrandt. A malformed input caused the parser to dereference a NULL pointer while applying the Hilderbrandt transformation.

Impact

Open Babel is a C++ library and CLI used to read and write chemistry file formats; it is shipped by Linux distributions and embedded in services that may parse untrusted input. Triggering this vulnerability requires the victim to open a malicious CACAO file with the obabel tool, the OBConversion API, or any of the language bindings (Python, Ruby, Java, R, Perl, C#, PHP).

Affected versions

All releases up to and including 3.1.1.

Patched version

3.2.0 (released 2026-05-26).

Patch

Fix commit: https://github.com/openbabel/openbabel/commit/ecaed96f Originally reported as #2827; fixes consolidated in #2913.

A minimized reproducer for this CVE is checked in under test/files/fuzz_regress/ and is exercised on every CI build under ASAN+UBSAN by the fuzzregresstest harness.

Credit

Reported via OSS-Fuzz.

Affected Packages

1 total 1 fixed
EcosystemPackageVulnerable rangeFix
🐍PyPIopenbabelall versions3.2.0pip install --upgrade 'openbabel==3.2.0'

Affected Products

1 product · 1 configurations
Application
open babelopenbabel
≤ 3.1.1
range

Detection & mitigation playbook

Open-source dependency
  1. Detect

    Scan your dependency tree (package-lock.json, pnpm-lock.yaml, requirements.txt, go.sum, etc.) for openbabel, including transitive dependencies — a direct dependency you never call can still pull in a vulnerable version.

  2. Fix

    Update openbabel to 3.2.0 or later, then make sure no transitive (indirect) dependency still pins the vulnerable range — O3 confirms CVE-2025-10999 is resolved across your whole dependency graph.

  3. Workarounds

    If you can't upgrade right away: gate or disable the affected feature, validate untrusted input at the boundary, and avoid passing attacker-controlled data into the vulnerable path. O3's runtime protection blocks exploitation in production as an interim safeguard until the upgrade lands.

Frequently Asked Questions

### Summary A memory-safety vulnerability in Open Babel's CACAO parser caused a NULL pointer dereference when reading a crafted input file. ### Details The flaw was in `CacaoFormat::SetHilderbrandt`. A malformed input caused the parser to dereference a NULL pointer while applying the Hilderbrandt transformation. ### Impact Open Babel is a C++ library and CLI used to read and write chemistry file formats; it is shipped by Linux distributions and embedded in services that may parse untrusted input. Triggering this vulnerability requires the victim to open a malicious CACAO file with the `ob
O3 Security · Impact-Aware SCA

Is CVE-2025-10999 in your dependencies?

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CVE-2025-10999: openbabel — Fixed in 3.2.0