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Malicious packageDiscovered by O3 Security

phenopacket-store-toolkitPyPI

Malicious code in phenopacket-store-toolkit (PyPI) Remove it immediately and rotate any exposed credentials.

MAL-2026-5322
Immediate action
Remove the package, then rotate any secrets the build/runtime could reach.
pip uninstall phenopacket-store-toolkit

What this malware does

The package phenopacket-store-toolkit version 0.1.7 contains a malicious .pth file (phenopacket_store_toolkit-setup.pth) that executes a Bun-based credential stealer on every Python startup via CPython's site.py exec() mechanism. The payload downloads the Bun runtime from the official GitHub release page, then runs an obfuscated JavaScript stealer that exfiltrates environment variables, .env files, SSH keys, and cloud credentials to an attacker-controlled GitHub repository. This is part of the Hades/Miasma campaign (also called Shai-Hulud), attributed to the TeamPCP threat actor.

Novel finding: gpsea/_index.js (same campaign) embeds CBRN-level dangerous-content text to trigger AI safety refusals in LLM-based security scanners, causing them to skip the file entirely.

C2 IP: 20.207.73.82 Sentinel file: /tmp/.bun_ran MITRE ATT&CK: T1546.018

Versions 0.1.7 were compromised.

Compromised packages start an obfuscated infostealer. The infostealer is a heavily obfuscated JavaScript code executed using Bun runtime on Python startup. It collectes all kinds of sensitive data, including API keys, credentials to package repositories, cryptocurrency assets, password manager data. Infostealer actively queries online services to collect additional secrets as well as attempts to gain persistence and spread further by publishing infected packages using collected credentials. Data are exfiltrated likely using Github. The code seems to threaten to wipe the user's data if it detects invalid GitHub tokens. Cleanup should be done with caution.

It seems to be related to the recent Mini Shai Hulud campaign.

Category: MALICIOUS - The campaign has clearly malicious intent, like infostealers.

Campaign: 2026-06-compr-woodpecker

Reasons (based on the campaign):

  • compromised-package

  • exfiltration-env-variables

  • exfiltration-cloud-tokens

  • exfiltration-credentials

  • abuses-pth

  • obfuscation

  • infostealer

  • The package contains code to detect if it is running in a sandbox environment.

  • exfiltration-crypto

  • files-exfiltration

  • destructive-actions

Malicious versions

1 flagged
0.1.7

Indicators of compromise (SHA-256)

5c1cff451aae02445a016621a9e769af3e154bf0d1f308739b24f0f96d3f309a
cb4e313f217cfa4681e9b2369626f20c4ce3c45e678134e31182374f4f36fd09
d88bfb8705da69b9a44ebbd6eee159150da48133788ed5134ee9d25dee170928

Frequently asked questions

No. phenopacket-store-toolkit on PyPI has been identified as a malicious package (version 0.1.7 flagged). It should be removed immediately — do not install or keep it in your dependency tree.

Campaign

2026-06-compr-woodpecker

References

Credits

  • Kamil Mańkowski (kam193) · analyst
  • O3 Security · finder

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phenopacket-store-toolkit (PyPI) malicious package — MAL-2026-5322 | O3 Security